Escobar L., MD., Farias, IP., Taphorn B., DC., Landines, M., Hrbek, T. 2013. Molecular diagnosis of the arowanas Osteoglossum ferreirai Kanazawa, 1966 and O. bicirrhossum (Cuvier, 1829) from the Orinoco and Amazon River basins. Neotrop Ichthyol. 11:335-340. doi:10.1590/S1679-62252013000200011
Kaefer, IL., Tsuji-Nishikido, BM., Mota, EP., Farias, IP., Lima, AP. 2013. The early stages of speciation in Amazonian forest frogs: Phenotypic conservatism despite strong genetic structure. Evol Biol. 40:228-245. doi:10.1007/s11692-012-9205-4
Olivares, AM., Hrbek, T., Escobar L., MD., Caballero, S. 2013. Population structure of the black arowana (Osteoglossum ferreirai) in Brazil and Colombia: implications for its management. Conserv Genet. doi:10.1007/s10592-013-0463-1
Papa, R., Kapan, DD., Counterman, BA., Maldonado, K., Lindstrom, DP., Reed, RD., Nijhout, HF., Hrbek, T., McMillan, WO. 2013. Multi-allelic major effect genes interact with minor effect QTLs to control adaptive color pattern variation in Heliconius erato. PLoS ONE. 8:e57033. doi:10.1371/journal.pone.0057033
Simões, PI., Kaefer, IL., Farias, IP., Lima, AP. 2013. An integrative appraisal of the diagnosis and distribution of Allobates sumtuosus (Morales, 2002) (Anura, Aromobatidae). Zootaxa. 3746:401-421.
Terencio, ML., Schneider, CH., Gross, MC., Vicari, MR., Farias, IP., Passos, KB., Feldberg, E. 2013. Evolutionary dynamics of repetitive DNA in Semaprochilodus (Characiformes, Prochilodontidae): A fish model for sex chromosome differentiation. Sex Dev. 7:325-333. doi:10.1159/000356691
Willis, SC., Farias, IP., Ortí, G. 2013. Multi-locus species tree for the Amazonian peacock basses (Cichlidae: Cichla): Emergent phylogenetic signal despite limited nuclear variation. Mol Phylogenet Evol. 69:479-90. doi:10.1016/j.ympev.2013.07.031
Abelló, P., Ai, W., Altmann, C., Bernardi, G., Bonato, O., Burchhardt, KM., Chen, X., Chen, Z., Cížková, D., Clouet, C., et al. 2012. Permanent genetic resources added to molecular ecology resources database 1 April 2012 - 31 May 2012. Mol Ecol Resour. 12:972-974. doi:10.1111/j.1755-0998.2012.03173.x
Boubli, JP., Hrbek, T. 2012. Introdução a Biodiversidade Amazônica. In: Marcon, JL., Menin, M., Araújo, MGP de., Hrbek, T. editors. Biodiversidade Amazônica: Caracterização, Ecologia e Conservação. Manaus, AM, Brazil, EDUA - UFAM; p. 11-17.
Boubli, JP., Rylands, AB., Farias, IP., Alfaro, ME., Lynch Alfaro, JW. 2012. Cebus phylogenetic relationships: a preliminary reassessment of the diversity of the untufted capuchin monkeys. Am J Primatol. 74:381-393. doi:10.1002/ajp.21998
Campos, Z., Sanaiotti, TM., Muniz, F de L., Farias, IP., Magnusson, WE. 2012. Parental care in the dwarf caiman, Paleosuchus palpebrosus Cuvier, 1807 (Reptilia: Crocodilia: Alligatoridae). J Nat Hist. 46:2979-2984. doi:10.1080/00222933.2012.724723
Colatreli, OP., Meliciano, NV., Toffoli, D., Farias, IP., Hrbek, T. 2012. Deep phylogenetic divergence and lack of taxonomic concordance in species of Astronotus (Cichlidae). Int J Evol Biol. 2012:915265. doi:10.1155/2012/915265
Frederico, RG., Farias, IP., Araújo, MLG., Charvet-Almeida, P., Alves-Gomes, JA. 2012. Phylogeography and conservation genetics of the Amazonian freshwater stingray Paratrygon aiereba Müller & Henle , 1841 (Chondrichthyes: Potamotrygonidae). Neotrop Ichthyol. 10:71-80. doi:10.1590/S1679-62252012000100007
Lynch Alfaro, JW., Boubli, JP., Olson, LE., Di Fiore, A., Wilson, B., Gutiérrez-Espeleta, GA., Chiou, KL., Schulte, M., Neitzel, S., Ross, V., et al. 2012. Explosive Pleistocene range expansion leads to widespread Amazonian sympatry between robust and gracile capuchin monkeys. J Biogeogr. 39:272-288. doi:10.1111/j.1365-2699.2011.02609.x
Marcon, JL., Menin, M., Araújo, MGP de., Hrbek, T. 2012. Biodiversidade Amazônica: Caracterização, Ecologia e Conservação. 1 ed. Manaus, AM, Brazil, EDUA - UFAM.
Reiss, P., Able, KW., Nunes, MS., Hrbek, T. 2012. Color pattern variation in Cichla temensis (Perciformes: Cichlidae): Resolution based on morphological, molecular, and reproductive data. Neotrop Ichthyol. 10:59-70. doi:10.1590/S1679-62252012000100006
Simões, PI., Lima, AP., Farias, IP. 2012. Restricted natural hybridization between two species of litter frogs on a threatened landscape in southwestern Brazilian Amazonia. Conserv Genet. 13:1145-1159. doi:10.1007/s10592-012-0362-x
Willis, SC., López-Fernández, H., Montaña, CG., Farias, IP., Ortí, G. 2012a. Species-level phylogeny of 'Satan's perches' based on discordant gene trees (Teleostei: Cichlidae: Satanoperca Günther 1862). Mol Phylogenet Evol. 63:798-808. doi:10.1016/j.ympev.2012.02.018
Willis, SC., Macrander, J., Farias, IP., Ortí, G. 2012b. Simultaneous delimitation of species and quantification of interspecific hybridization in Amazonian peacock cichlids (genus Cichla) using multi-locus data. BMC Evol Biol. 12:96. doi:10.1186/1471-2148-12-96
Agata, K., Alasaad, S., Almeida-Val, VMF de., Álvarez-Dios, JA., Barbisan, F., Beadell, JS., Beltrán, JF., Benítez, M., Bino, G., Bleay, C., et al. 2011. Permanent Genetic Resources added to Molecular Ecology Resources Database 1 December 2010-31 January 2011. Mol Ecol Resour. 11:586-589. doi:10.1111/j.1755-0998.2011.03004.x
Amado, MV., Hrbek, T., Farias, IP. 2011. A molecular perspective on systematics, taxonomy and classification Amazonian discus fishes of the genus Symphysodon. Int J Evol Biol. 2011:360654. doi:10.4061/2011/360654
Castro, MM., Farias, IP., Borborema-Santos, CM., Correia, G., Astolfi-Filho, S. 2011. Prevalence of human papillomavirus (HPV) type 16 variants and rare HPV types in the central Amazon region. Genet Mol Res. 10:186-196. doi:10.4238/vol10-1gmr992
Muniz, F de L., Da Silveira, R., Campos, Z., Magnusson, WE., Hrbek, T., Farias, IP. 2011. Multiple paternity in the Black Caiman (Melanosuchus niger) population in the Anavilhanas National Park, Brazilian Amazonia. Amphibia-Reptilia. 32:428-437. doi:10.1163/017353711X587741
Da Silva, T de J., Monjeló, LA dos S., Viana, M das N., Pezzuti, JCB., Andrade, PCM., Vogt, RC., Farias, IP. 2011. Population genetics analysis of Podocnemis sextuberculata (Testudines, Podocnemidae): lack of population structure in the central Amazon basin. Genet Mol Res. 10:1393-1402. doi:10.4238/vol10-3gmr1163
Souza, ER., Ribeiro, LB., Feldberg, E., Farias, IP., Hrbek, T., Gross, MC. 2011. Comparative cytogenetics of two of the smallest Amazonian fishes, Fluviphylax simplex and Fluviphylax zonatus (Cyprinodontiformes, Poeciliidae). Comp Cytogenet. 5:411-422. doi:10.3897/compcytogen.v5i5.1562
Batista, J. d. S., Farias, I. P., Formiga-Aquino, K., Sousa, A. C. B. & Alves-Gomes, J. A. 2010. DNA microsatellite markers for "dourada" (Brachyplatystoma rousseauxii, Siluriformes: Pimelodidae), a migratory catfish of utmost importance for fisheries in the Amazon: development, characterization and inter-specific amplification. Conservation Genetic Resources 2:5-10. doi:10.1007/s12686-009-9117-5
Fantin, C., Farias, I. P., Monjeló, L. A. d. S. & Hrbek, T. 2010. An analysis of the reproductive strategy of Podocnemis erythrocephala (Testudines, Podocnemididae) in two localities of the Brazilian Amazon. Genetics and Molecular Research 9:435-440. doi:10.4238/vol9-1gmr749
Farias, I. P., Torrico, J. P., García-Dávila, C., Santos, M. d. C. F., Hrbek, T. & Renno, J.-F. 2010. Are rapids a barrier for floodplain fishes of the Amazon basin? A demographic study of the keystone floodplain species Colossoma macropomum (Teleostei: Characiformes. Molecular Phylogenetics and Evolution 56:1129-1135. doi:10.1016/j.ympev.2010.03.028
Jahn, A. E., Levey, D. J., Farias, I. P., Mamani, A. M., Vidoz, J. Q. & Freeman, B. 2010. Morphological and genetic variation between migratory and non-migratory tropical kingbirds during spring migration in central South America. The Wilson Journal of Ornithology 122:236-243. doi:10.1676/09-086.1
Oliveira, D. P. d., Marioni, B., Campos, Z., Farias, I. P. & Hrbek, T. 2010. Microsatellite markers for mating system and population analyses of the spectacled caiman Caiman crocodilus (Linnaeus 1758. Conservation Genetic Resources 2:181-184. doi:10.1007/s12686-010-9221-6
Passos, K. B., Leão, A. S. d. A., Oliveira, D. P. d., Farias, I. P. & Hrbek, T. 2010. Polymorphic microsatellite markers for the overexploited Amazonian fish, Semaprochilodus insignis (Jardine and Schomburgk 1841. Conservation Genetic Resources 1:231-234. doi:10.1007/s12686-010-9245-y
Sampaio, R., Munari, D. P., Röhe, F., Ravetta, A. L., Rubim, P., Farias, I. P., da Silva, M. N. F. & Cohn-Haft, M. 2010. New distribution limits of Bassaricyon alleni Thomas 1880 and insights on an overlooked species in the western Brazilian Amazon. Mammalia 74:323-327. doi:10.1515/MAMM.2010.008
Sousa, C. F. S., Santos, C. H. A., Sousa, A. C. B., Paula-Silva, M. N., Souza, A., Ferreira-Nozawa, M. S., Farias, I. P. & Almeida-Val, V. M. F. d. 2010. Development and characterization of microsatellite markers in Astronotus crassipinis (Heckel, 1840. Conservation Genetic Resources 1:277-280. doi:10.1007/s12686-009-9068-x
Willis, S. C., Nunes, M. S., Montaña, C. G., Farias, I. P., Ortí, G. & Lovejoy, N. R. 2010. The Casiquiare river acts as a corridor between the Amazonas and Orinoco river basins: biogeographic analysis of the genus Cichla. Molecular Ecology 19:1014-1030. doi:10.1111/j.1365-294X.2010.04540.x
Anciães, M., Durães, R., Cerqueira, M. C., Fortuna, J. R., Sohn, N., Cohn-Haft, M. & Farias, I. P. 2009. Diversidade de piprídeos (Aves: Pipridae) amazônicos: seleção sexual, ecologia e evolução. Oecologia Brasiliensis 13:165-189.
da Silva, T. d. J., Hrbek, T. & Farias, I. P. 2009. Microsatellite markers for the silver arowana (Osteoglossum bicirrhosum, Osteoglossidae, Osteoglossiformes), the Amazonian dragon fish, and amplification in other Osteoglossiformes species. Molecular Ecology Resources 9:1019-1022. doi:10.1111/j.1755-0998.2009.02556.x
Gravena, W., Hrbek, T., da Silva, V. M. F., Astolfi-Filho, S. & Farias, I. P. 2009. Microsatellite loci for population and parentage analysis in the Amazon River dolphin (Inia geoffrensis de Blainville, 1817. Molecular Ecology Resources 9:600-603. doi:10.1111/j.1755-0998.2008.02458.x
Rodrigues, F. C., Farias, I. P., Batista, J. d. S. & Alves-Gomes, J. A. 2009. Isolation and characterization of microsatellites loci for piramutaba (Brachyplatystoma vaillantii, Siluriformes: Pimelodidae), one of the commercially most important migratory catfishes in the Amazon Basin. Conservation Genetic Resources 1:365-368. doi:10.1007/s12686-009-9084-x
Santos, M. d. C. F., Hrbek, T. & Farias, I. P. 2009. Microsatellite markers for the tambaqui (Colossoma macropomum, Serrasalmidae, Characiformes), an economically important keystone species of the Amazon River floodplain. Molecular Ecology Resources 9:874-876. doi:10.1111/j.1755-0998.2008.02331.x
Amado, M. V., Hrbek, T., Gravena, W., Fantin, C., de Assunção, E. N., Astolfi-Filho, S. & Farias, I. P. 2008. Isolation and characterization of microsatellite markers for the ornamental discus fish, Symphysodon discus, and cross-species amplification in other Heroini cichlid species. Molecular Ecology Resources 8:1451-1453. doi:10.1111/j.1755-0998.2008.02200.x
Banhos, A., Hrbek, T., Gravena, W., Sanaiotti, T. M. & Farias, I. P. 2008. Genomic resources for the conservation and management of the Harpy Eagle (Harpia harpyja. Genetics and Molecular Biology 30:146-154. doi:10.1590/S1415-47572008000100025
Boubli, J. P., Da Silva, M. N. F., Amado, M. V., Hrbek, T., Pontual, F. B. & Farias, I. P. 2008. A taxonomic reassessment of black uakari monkeys, Cacajao melanocephalus group, Humboldt (1811), with the description of two new species. International Journal of Primatology 29:723-741. doi:10.1007/s10764-008-9248-7
Fantin, C., Viana, L. S., Monjeló, L. A. d. S. & Farias, I. P. 2008. Polyandry in Podocnemis unifilis (Pleurodira; Podocnemididae), the vulnerable yellow-spotted Amazon River turtle. Amphibia-Reptilia 29:479-486. doi:10.1163/156853808786230361
Farias, I. P. & Hrbek, T. 2008. Patterns of diversification in the discus fishes (Symphysodon spp. Cichlidae) of the Amazon basin. Molecular Phylogenetics and Evolution 49:32-43. doi:10.1016/j.ympev.2008.05.033
Figueiredo, R. M. P. d., Naveca, F. G., Bastos, M. d. S., Melo, M. d. N., Viana, S. d. S., Mourão, M. P. G., Costa, C. A. & Farias, I. P. 2008. Dengue virus type 4, Manaus, Brazil. Emerging Infectious Diseases 14:667-669. doi:10.3201/eid1404.071185
Galetti Jr., P. M., Rodrigues, F. P., Solé-Cava, A. M., Miyaki, C. Y., Carvalho, D. d., Eizirik, E., Veasey, E. A., Santos, F. R., Farias, I. P., Viana, J. A., Oliveira, L. R., Weber, L. I., Almeida Toledo, L. F., Francisco, M. R., Redondo, R. A. F., Siciliano, S., Del Lama, S. N., Freitas, T. R. O., Hrbek, T. & Molina, W. F. 2008. Genética da conservação brasileira. In Fundamentos de Genética da Conservação (Frankham, R., Ballou, J. D. & Briscoe, D. A., eds.), pp. 244-274. Ribeirão Preto, SP, Brazil: Editora SBG.
Gravena, W., Hrbek, T., da Silva, V. M. F. & Farias, I. P. 2008. Amazon River dolphin love fetishes: From folklore to molecular forensics. Marine Mammal Science 24:969-978. doi:10.1111/j.1748-7692.2008.00237.x
Hrbek, T. & Farias, I. P. 2008. The complete mitochondrial genome of the pirarucu (Arapaima gigas, Arapaimidae, Osteoglossiformes. Genetics and Molecular Biology 31:293-302. doi:10.1590/S1415-47572008000200024
Hrbek, T. & Taphorn, D. C. 2008. Description of a new of annual rivulid killifish genus from Venezuela. Zootaxa 1734:27-42.
Hrbek, T., Vasconcelos, W. R., Rebêlo, G. H. & Farias, I. P. 2008. Phylogenetic relationships of South American alligatorids and the Caiman of Madeira River. Journal of Experimental Zoology Part A: Ecological Genetics and Physiology 309A:588-599. doi:10.1002/jez.430
Toffoli, D., Hrbek, T., Araújo, M. L. G., Almeida, M. P., Charvet-Almeida, P. & Farias, I. P. 2008. A test of the utility of barcoding in the radiation of the freshwater stingray genus Potamotrygon (Potamotrygonidae: Rajiformes. Genetics and Molecular Biology 31:324-336. doi:10.1590/S1415-47572008000200028
Vasconcelos, W. R., Hrbek, T., Da Silveira, R., de Thoisy, B. & Farias, I. P. 2008. A phylogeographic analysis of the black caiman (Melanosuchus niger. Journal of Experimental Zoology Part A: Ecological Genetics and Physiology 309A:600-613. doi:10.1002/jez.452
Fantin, C., Carvalho, C. F., Hrbek, T., Sites Jr., J. W., Monjeló, L. A. d. S., Astolfi-Filho, S. & Farias, I. P. 2007. Microsatellite DNA markers for Podocnemis unifilis, the endangered yellow-spotted Amazon River turtle. Molecular Ecology Notes 7:1235-1238. doi:10.1111/j.1471-8286.2007.01842.x
Farias, I. P., Jerozolimski, A., Melo, A., Viana, M. d. N., Martins, M. & Monjeló, L. A. d. S. 2007. Population genetics of the Amazonian tortoises, Chelonoidis denticulata and C. carbonaria, (Cryptodira: Testudinidae) in an area of sympatry. Amphibia-Reptilia 28:357-365. doi:10.1163/156853807781374836
Hrbek, T., Crossa, M. & Farias, I. P. 2007. Conservation strategies for Arapaima gigas (Schinz, 1822) and the Amazonian várzea ecosystem. Brazilian Journal of Biology 67:909-917. doi:10.1590/S1519-69842007000500015
Hrbek, T., Seckinger, J. & Meyer, A. 2007. A phylogenetic and biogeographic perspective on the evolution of poeciliid fishes. Molecular Phylogenetics and Evolution 43:986-998. doi:10.1016/j.ympev.2006.06.009
O'Neill, M. J., Lawton, B. R., Mateos, M., Liscinsky, D. M., Ferreri, G. C., Hrbek, T., Meredith, R. W., Reznick, D. N. & O'Neill, R. J. 2007. Ancient and continuing Darwinian selection on Insulin-like Growth Factor II in placental fishes. Proceedings of the National Academy of Sciences of the United States of America 104:12404-12409. doi:10.1073/pnas.0705048104
Reznick, D. N., Hrbek, T., Caura, S., DeGreef, J.-J. & Roff, D. A. 2007. Life history and systematics of Xenodexia ctenolepis: implications for life history evolution in the family Poeciliidae. Biological Journal of the Linnean Society 92:77-85. doi:10.1111/j.1095-8312.2007.00869.x
Santos, M. d. C. F., Ruffino, M. L. & Farias, I. P. 2007. High levels of genetic variability and panmixia of the tambaqui Colossoma macropomum (Cuvier, 1818) in the main channel of the Amazon River. Journal of Fish Biology 71A:33-44. doi:10.1111/j.1095-8649.2007.01514.x
Willis, S. C., Nuñes, M. S., Montaña, C. G., Farias, I. P. & Lovejoy, N. R. 2007. Systematics, biogeography, and evolution of the Neotropical peacock basses Cichla (Perciformes: Cichlidae. Molecular Phylogenetics and Evolution 44:291-307. doi:10.1016/j.ympev.2006.12.014
Blanco, J. L., Hrbek, T. & Doadrio, I. 2006. A new species of the genus Aphanius (Nardo, 1832) (Actinopterygii, Cyprinodontidae) from Algeria. Zootaxa 1158:39-53.
de Thoisy, B., Hrbek, T., Farias, I. P., Vasconcelos, W. R. & Lavergne, A. 2006. Genetic structure and population dynamics of Black caiman (Melanosuchus niger. Biological Conservation 133:474-482. doi:10.1016/j.biocon.2006.07.009
Farias, I. P., Miniz, L. B., Astolfi-Filho, S. & Sampaio, I. 2006. Isolation and characterization of DNA microsatellite primers for Cynoscion acoupa, the most exploited sciaenid fish along the coast of Brazil. Molecular Ecology Notes 6:660-663. doi:10.1111/j.1471-8286.2006.01289.x
Hrbek, T., de Brito, R. A., Wang, B., Pletscher, L. S. & Cheverud, J. M. 2006. Genetic characterization of a new set of recombinant inbred lines (LGXSM) formed from the intercross of SM/J and LG/J inbred mouse strains. Mammalian Genome 17:417-429. doi:10.1007/s00335-005-0038-7
Hrbek, T., Keivany, Y. & Coad, B. W. 2006. New species of Aphanius (Teleostei, Cyprinodontidae) from Isfahan province of Iran and a reanalysis of other Iranian species. Copeia 2006:244-255. doi:10.1643/0045-85112006)6[244:NSOATC]2.0.CO;2
Santos, S., Hrbek, T., Farias, I. P., Schneider, H. & Sampaio, I. 2006. Population genetic structuring of the king weakfish, Macrodon ancylodon (Sciaenidae), in Atlantic coastal waters of South America: deep genetic divergence without morphological change. Molecular Ecology 15:4361-4373. doi:10.1111/j.1365-294X.2006.03108.x
Vasconcelos, W. R., Hrbek, T., Da Silveira, R., De Thoisy, B., Marioni, B. & Farias, I. P. 2006. Population genetic analysis of Caiman crocodilus (Linnaeus, 1758) from South America. Genetics and Molecular Biology 21:220-230. doi:10.1590/S1415-47572006000200006
Batista, J. d. S., Formiga-Aquino, K., Farias, I. P. & Alves-Gomes, J. A. 2005. Variabilidade genética da dourada e da piramutaba na bacia Amazônica. In O Manejo Da Pesca Dos Grandes Bagres Migradores: Piramutaba e Dourada no Eixo Solimões-Amazonas (Fabré, N. N. & Barthem, R. B., eds.), pp. 15-19. Manaus, Brazil: Edições ProVárzea/Ibama.
Cantanhede, A. M., da Silva, V. M. F., Farias, I. P., Hrbek, T., Lazzarini, S. M. & Alves-Gomes, J. A. 2005. Phylogeography and population genetics of the endangered Amazonian manatee, Trichechus inunguis Natterer, 1883 (Mammalia, Sirenia. Molecular Ecology 14:401-413. doi:10.1111/j.1365-294X.2004.02413.x
Ehrich, T. H., Hrbek, T., Kenney-Hunt, J. P., Pletscher, L. S., Wang, B., Semenkovich, C. F. & Cheverud, J. M. 2005. Fine-mapping gene-by-diet interactions on Chromosome 13 in a LG/J x SM/J murine model of obesity. Diabetes 54:1863-1872. doi:10.2337/diabetes.54.6.1863
Hrbek, T., Farias, I. P., Crossa, M., Sampaio, I., Porto, J. I. R. & Meyer, A. 2005. Population genetic analysis of Arapaima gigas, one of the largest freshwater fishes of the Amazon basin: implications for its conservation. Animal Conservation 8:297-308. doi:10.1017/S1367943005002210
Hrbek, T., Taphorn, D. C. & Thomerson, J. E. 2005. Molecular phylogeny of Austrofundulus Myers (Cyprinodontiformes: Rivulidae), with revision of the genus and the description of four new species. Zootaxa 825:1-39.
Vermeulen, F. B. M. & Hrbek, T. 2005. Kryptolebias sepia n. sp. (Actinopterygii: Cyprinodontiformes: Rivulidae), a new killifish from the Tapanahony River drainage in southeast Surinam. Zootaxa 928:1-20.
Bardakci, F., Tatar, N. & Hrbek, T. 2004. Genetic relationships between Anatolian species and subspecies of Aphanius Nardo, 1827 (Pisces, Cyprinodontiformes) based on RAPD markers. Biologia, Bratislava 59:559-566.
Cheverud, J. M., Ehrich, T. H., Hrbek, T., Kenney, J. P., Pletscher, L. S. & Semenkovich, C. F. 2004. Quantitative Trait Loci for obesity and diabetes-related traits and their dietary responses to a high fat diet in the LGXSM recombinant inbred mouse strains. Diabetes 53:3328-3336. doi:10.2337/diabetes.53.12.3328
Farias, I. P., Da Silveira, R., de Thoisy, B., Monjeló, L. A. d. S., Thorbjarnarson, J. & Hrbek, T. 2004. Genetic diversity and population structure of Amazonian crocodilians. Animal Conservation 7:265-272. doi:10.1017/S136794300400143X
Hrbek, T., Deus, C. P. d. & Farias, I. P. 2004. Rivulus duckensis (Teleostei; Cyprinodontiformes): New species from the Tarumã basin of Manaus, Amazonas, Brazil, and its relationship to other Neotropical Rivulidae. Copeia 2004:569-576. doi:10.1643/CI-03-277R1
Hrbek, T., Stölting, K. N., Bardakçi, F., Küçük, F., Wildekamp, R. H. & Meyer, A. 2004. Plate tectonics and biogeographical patterns of the Pseudophoxinus (Pisces: Cypriniformes) species complex of central Anatolia, Turkey. Molecular Phylogenetics and Evolution 32:297-308. doi:10.1016/j.ympev.2003.12.017
Rodrigues, D. P., Vinson, C., Ciampi, A. Y., Farias, I. P., Lemes, M. R., Astolfi-Filho, S. & Clement, C. R. 2004. Novel microsatellite markers for Bactris gasipaes (Palmae. Molecular Ecology Notes 4:575-576. doi:10.1111/j.1471-8286.2004.00739.x
Brazilian National Genome Project Consortium, Ribeiro de Vasconcelos, A. T., de Almeida, D. F., Hungria, M., Guimaraes, C. T., Antonio, R. V., Almeida, F. C., de Almeida, L. G. P., de Almeida, R., Alves-Gomes, J. A., Andrade, E. M., Araripe, J., de Araujo, M. F. F., Astolfi-Filho, S., Azevedo, V., Baptista, A. J., Bataus, L. A. M., Batista, J. d. S., Belo, A., van den Berg, C., Bogo, M., Bonatto, S., Bordignon, J., Brigido, M. M., Brito, C. A., Brocchi, M., Burity, H. A., Camargo, A. A., Cardoso, D. d. D. d. P., Carneiro, N. P., Carraro, D. M., Carvalho, C. M. B., Cascardo, J. C. d. M., Cavada, B. S., Chueire, L. M. O., Creczynski-Pasa, T. B., da Cunha-Junior, N. C., Fagundes, N., Falcao, C. L., Fantinatti, F., Farias, I. P., Felipe, M. S. S., Ferrari, L. P., Ferro, J. A., Ferro, M. I. T., Franco, G. R., de Freitas, N. S. A., Furlan, L. R., Gazzinelli, R. T., Gomes, E. A., Goncalves, P. R., Grangeiro, T. B., Grattapaglia, D., Grisard, E. C., Hanna, E. S., Jardim, S. N., Laurino, J., Leoi, L. C. T., Agnez Lima, L. F., Loureiro, M. d. F., de Lyra, M. d. C. C. P., Madeira, H. M. F., Manfio, G. P., Maranhao, A. Q., Martins, W. S., di Mauro, S. M. Z., de Medeiros, S. R. B., Meissner, R. d. V., Moreira, M. A. M., do Nascimento, F. F., Nicolas, M. F., Oliveira, J. G., Oliveira, S. C., Paixao, R. F. C., Parente, J. A., Pedrosa, F. d. O., Pena, S. D. J., Pereira, J. O., Pereira, M., Pinto, L. S. R. C., Pinto, L. d. S., Porto, J. I. R., Potrich, D. P., Ramalho-Neto, C. E., Reis, A. M. M., Rigo, L. U., Rondinelli, E., do Santos, E. B. P., Santos, F. R., Schneider, M. P. C., Seuánez, H. N., Silva, A. M. R., da Silva, A. L. d. C., Silva, D. W., Silva, R., Simoes, I. d. C., Simon, D., Soares, C. M. d. A., Soares, R. d. B. A., Souza, E. M., de Souza, K. R. L., Souza, R. C., Steffens, M. B. R., Steindel, M., Teixeira, S. R., Urmenyi, T., Vettore, A., Wassem, R., Zaha, A. & Simpson, A. J. G. 2003. The complete genome sequence of Chromobacterium violaceum reveals remarkable and exploitable bacterial adaptability. Proceedings of the National Academy of Sciences of the United States of America 100:11660-11665. doi:10.1073/pnas.1832124100
Farias, I. P., Hrbek, T., Brinkmann, H., Sampaio, I. & Meyer, A. 2003. Characterization and isolation of DNA microsatellite primers for Arapaima gigas, an economically important but severely over-exploited fish species of the Amazon basin. Molecular Ecology Notes 3:128-130. doi:10.1046/j.1471-8286.2003.00375.x
Hrbek, T. & Meyer, A. 2003. Closing of the Tethys Sea and the phylogeny of Eurasian killifishes (Cyprinodontiformes: Cyprinodontidae. Journal of Evolutionary Biology 16:17-36. doi:10.1046/j.1420-9101.2003.00475.x
Hrbek, T. & Wildekamp, R. H. 2003. Description of a new Aphanius species (Pisces; Cyprinodontiformes) from the Sakarya River basin in the western part of the central Anatolian plain, Turkey. Ichthyological Exploration of Freshwaters 14:137-144.
Parsons, K. J., Robinson, B. W. & Hrbek, T. 2003. Getting into shape: an empirical comparison of several traditional truss-based and a newer geometric morphometric method. Environmental Biology of Fishes 67:417-431. doi:10.1023/A:1025895317253
Farias, I. P., Hrbek, T., Da Silveira, R., Monjeló, L. A. d. S., de Thoisy, B. & Thorbjarnarson, J. 2002. Population genetic structure of Amazonian crocodilians: preliminary results. In 16th Working Meeting of the Crocodile Specialist Group of the Species Survival Commission of IUCN - The World Conservation Union (Woodward, A. R., ed.), pp. 213-218. Gainesville, FL: IUCN - Gland, Switzerland.
Hrbek, T., Küçük, F., Frickey, T., Stölting, K. N., Wildekamp, R. H. & Meyer, A. 2002. Molecular phylogeny and historical biogeography of the Aphanius (Pisces, Cyprinodontiformes) species complex of central Anatolia, Turkey. Molecular Phylogenetics and Evolution 25:125-137. doi:10.1016/S1055-7903(02)00203-8
Andrade, F., Schneider, H., Farias, I. P., Feldberg, E. & Sampaio, I. 2001. Análise filogenética das espécies simpátricas de Tucunarés (Cichla, Perciformes) com registro de hibridização em diferentes ecosistemas da Amazônia brasileira. Revista Virtual de Iniciação Científica Belém 1:1-11.
Farias, I. P., Ortí, G., Sampaio, I., Schneider, H. & Meyer, A. 2001. The cytochrome b as a phylogenetic marker: the limits of resolution for analysing relationships among cichlid fishes. Journal of Molecular Evolution 53:89-103. doi:10.1007/s002390010197
Porto, J. I. R., Alves-Gomes, J. A., Farias, I. P. & Feldberg, E. 2001. Using molecular biology techniques to characterize the diversity of Amazonian ornamental fishes. In Conservation and Management of Ornamental Fish Resources of the Rio Negro Basin, Amazonia, Brazil - Project Piaba (Chao, N. L., Petry, P., Prang, G., Sonnenschein, L. & Tlusty, M., eds.), pp. 227-236. Manaus, Brazil: Universidade do Amazonas Press.
Farias, I. P., Ortí, G. & Meyer, A. 2000. Total evidence: molecules, morphology, and the phylogenetics of cichlid fishes. Journal of Experimental Zoology Part B: Molecular and Developmental Evolution 288:76-92. doi:10.1002/(SICI)1097-010X20000415)288:1<76::AID-JEZ8>3.0.CO;2-P
Farias, I. P., Ortí, G., Sampaio, I., Schneider, H. & Meyer, A. 1999. Mitochondrial DNA phylogeny of the family Cichlidae: Monophyly and fast molecular evolution of the Neotropical assemblage. Journal of Molecular Evolution 48:703-711. doi:10.1007/PL00006514
Hrbek, T. & Larson, A. 1999. The evolution of diapause in the killifish family Rivulidae (Atherinomorpha, Cyprinodontiformes): A molecular phylogenetic and biogeographic perspective. Evolution 53:1200-1216. doi:10.2307/2640823
Farias, I. P., Schneider, H. & Sampaio, I. 1998. Molecular phylogeny of neotropical cichlids: the relationships of Cichlasomines and Heroines. In Phylogeny and Classification of Neotropical Fishes (Malabarba, L. R., Reis, R. E., Vari, R. P., Lucena, Z. M. S. & Lucena, C. A. S., eds.), pp. 499-508. Porto Alegre, RG, Brazil: EDIPUCRS.
Podrabsky, J. E., Hrbek, T. & Hand, S. C. 1998. Physical and chemical characteristics of ephemeral pond habitats in the Maracaibo basin and Llanos region of Venezuela. Hydrobiologia 362:67-78. doi:10.1023/A:1003168704178
Farias, I. P., Silva, M. N. & Almeida-Val, V. M. F. d. 1997. No co-expression of LDH-C in Amazon Cichlids. Comparative Biochemistry and Physiology 117:315-319.
Almeida-Val, V. M. F. d. & Farias, I. P. 1995. Respiration in fishes of the Amazon: metabolic adjustments to chronic hypoxia. In Physiology and Biochemistry of the Fishes of the Amazon (Almeida-Val, V. M. & Val, A. L., eds.. Manaus, Brazil: Editora da Universidade do Amazonas.
Almeida-Val, V. M. F. d., Farias, I. P., Silva, M. N. & Duncan, W. 1995. Biochemical adjustments to hypoxia in Amazon cichlids. Brazilian Journal of Medical and Biological Research 28:1257-1264.
Moura, M., Farias, I. P. & Val, A. L. 1994. Temperature effects on leukocytes of Colossoma macropomum and Hoplosternum littorale. Brazilian Journal of Medical and Biological Research 27:1589-1598.
Farias, I. P. & Almeida-Val, V. M. F. d. 1992. Malato dehydrogenase (sMDH) in Amazon cichlid fishes: evolutionary features. Comparative Biochemistry and Physiology 103:939-943.
Farias, I. P., Almeida-Val, V. M. F. d., Caraciolo, M., Mesquita, L. & Val, A. L. 1992. LDH isozymes in Amazon fish - III. Distribution patterns and functional properties in Serrasalmidae (Teleostei, Ostariophysi. Comparative Biochemistry and Physiology 103:119-125.